Colette's Research
BRAF and NRAS Mutations Similar to Cutaneous and Mucosal Melanomas
Thirty tumors were analyzed using Sanger sequencing for copy number alterations throughout the genome.

BRAF mutations identified in 20%
NRAS mutations detected in 18%

The presence of NRAS or BRAF mutations in a mutually exclusive pattern occurs in 47% of conjunctival melanomas.
How it was tested
  • Ten micrometer thick sections of DNA cut from tumor tissues
  • Array-based comparative genomic hybridization used to conduct analysis of DNA CNAs
  • Screen run for known oncogene mutations
  • Sanger sequecing conducted to amplify BRAF exon 11 and 15 and NRAS exon 1 and 2
Results: Tumors and Patients
  • 49%females, 51% males
  • median age 64 years
  • no metastatic tumor samples included
  • 52% originated from primary acquired melanosis, 29% from nevi, 18% from novo
  • 58% stage one, 25% stage two, 17% stage three
Copy Number Analysis
  • 8 sampes hybridized with unamplified DNA
  • 24 samples hybridized with whole genome amplification of DNA
BRAF and NRAS mutations
Main mutations

Mutually Exclusive
Sentinel Lymph Node Biopsy
Staging patients with conjunctival melanoma.

Very accurate

In general serious tumors were >2mm thick
Side effects
Blue staining of epibular surface (five patients)

transient facial nerve palsy (one patient)
NRAS mutation
  • Provides instructions for N-Ras protein
  • Regulates cell division
  • N-Ras protein converts GTP into GDP
  • Mutation of gene expression (phenotypic)
  • Inactive when GTP is turned into GDP but when it is bound to GDP it stops relaying signals to the cell nucleus

Locations: 1p13.2
base pairs 115,247,084 to 115,259,514 on chromosome 1 

BRAF mutation
  • Provides intsructions for protein that helps transmit chemical signals from outside of the cell to the cell's nucleus.
  • A part of RAS/MAPK pathway that regulates proliferation, differentiation, migration, and apoptosis
  • Mutation changes a single amino acid which disrupts RAS/MAPK signaling pathway in cells throughout the body

Location: 7q34
base pairs 140,415,748 to 140,624,563 on chromosome 7
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